Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Ccdc175 ENSRNOG00000004774

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Description

coiled-coil domain containing 175 [Source:RGD Symbol;Acc:1560894]

Gene Synonyms

LOC500668

Location

Primary_assembly 6: 96,398,201-96,480,885 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 2 transcripts (splice variants) and 87 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000006346.9	Ccdc175-201	2585	817aa	ENSRNOP00000006346.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000105864.2	Ccdc175-202	2432	766aa	ENSRNOP00000081661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSI1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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