Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cd48 ENSRNOG00000004737

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Description

Cd48 molecule [Source:RGD Symbol;Acc:620620]

Gene Synonyms

SLAMF2

Location

Primary_assembly 13: 84,185,532-84,209,142 forward strand.

mRatBN7.2:CM026986.1

About this gene

This gene has 3 transcripts (splice variants), 106 orthologues, 10 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113999.1	Cd48-203	2317	222aa	ENSRNOP00000079741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNL0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000006306.8	Cd48-201	1617	218aa	ENSRNOP00000006306.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q3B4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000111655.1	Cd48-202	554	151aa	ENSRNOP00000084304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYW8	-

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Summary

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