Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc38a10 ENSRNOG00000004604

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Description

solute carrier family 38, member 10 [Source:RGD Symbol;Acc:1306356]

Gene Synonyms

LOC303740, RGD1306356

Location

Primary_assembly 10: 105,885,250-105,935,043 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094909.2	Slc38a10-202	4691	1106aa	ENSRNOP00000086955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000006225.10	Slc38a10-201	4667	1098aa	ENSRNOP00000006225.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q2J1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095802.2	Slc38a10-203	4484	1037aa	ENSRNOP00000081337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRR0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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