Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Clhc1 ENSRNOG00000004456

.

Description

clathrin heavy chain linker domain containing 1 [Source:RGD Symbol;Acc:1307937]

Gene Synonyms

LOC289865, RGD1307937

Location

Primary_assembly 14: 107,488,643-107,529,669 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 3 transcripts (splice variants), 166 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000006085.7	Clhc1-201	2171	595aa	ENSRNOP00000006085.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JQB9 Q5XIR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000144592.1	Clhc1-202	2321	585aa	ENSRNOP00000108221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000168050.1	Clhc1-203	2253	561aa	ENSRNOP00000101244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.