Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Mgat4c ENSRNOG00000004149

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Description

MGAT4 family, member C [Source:RGD Symbol;Acc:1307871]

Gene Synonyms

LOC299756, RGD1307871

Location

Primary_assembly 7: 38,596,065-39,362,078 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 5 transcripts (splice variants), 271 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000170068.1	Mgat4c-205	3842	523aa	ENSRNOP00000109832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000159425.1	Mgat4c-204	3788	522aa	ENSRNOP00000103428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144018.1	Mgat4c-202	3748	481aa	ENSRNOP00000110863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000005523.9	Mgat4c-201	3606	478aa	ENSRNOP00000005523.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IGA6 D3ZEV3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000146894.1	Mgat4c-203	3515	493aa	ENSRNOP00000105158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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