Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: R3hdm1 ENSRNOG00000004099

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Description

R3H domain containing 1 [Source:RGD Symbol;Acc:1307497]

Gene Synonyms

LOC304763, R3hdm

Location

Primary_assembly 13: 42,148,290-42,286,311 forward strand.

GRCr8:CM070403.1

About this gene

This gene has 4 transcripts (splice variants), 230 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005372.7	R3hdm1-201	4817	1133aa	ENSRNOP00000005372.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000100423.2	R3hdm1-202	4702	1099aa	ENSRNOP00000086415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GEX2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000111100.2	R3hdm1-203	4662	1089aa	ENSRNOP00000078882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLR3	-
ENSRNOT00000135119.1	R3hdm1-204	4513	1038aa	ENSRNOP00000111494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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