Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccdc42 ENSRNOG00000004075

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Description

coiled-coil domain containing 42 [Source:RGD Symbol;Acc:1565925]

Gene Synonyms

LOC303234, RGD1565925

Location

Primary_assembly 10: 53,787,810-53,808,417 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 111 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005423.8	Ccdc42-201	1381	316aa	ENSRNOP00000005423.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HFK9 D3ZAZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000161588.1	Ccdc42-204	1274	305aa	ENSRNOP00000100417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000105007.2	Ccdc42-202	1159	242aa	ENSRNOP00000085316.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZW4	-
ENSRNOT00000132635.1	Ccdc42-203	1119	298aa	ENSRNOP00000099325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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