Gene: Ccdc88a ENSRNOG00000004057

Description

coiled coil domain containing 88A [Source:RGD Symbol;Acc:1306694]

Gene Synonyms

Ape, GIV, Hkrp1, LOC305605, RGD1306694

Location

Primary_assembly 14: 107,305,199-107,453,285 forward strand.

GRCr8:CM070404.1

About this gene

This gene has 5 transcripts (splice variants), 214 orthologues, 5 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000127862.1	Ccdc88a-204	7015	2016aa	ENSRNOP00000105965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112813.2	Ccdc88a-203	5915	1873aa	ENSRNOP00000086390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5W7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000150880.1	Ccdc88a-205	5775	1846aa	ENSRNOP00000106843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000095959.2	Ccdc88a-202	5772	1845aa	ENSRNOP00000083554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZW24	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000067591.5	Ccdc88a-201	5655	1884aa	ENSRNOP00000063373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZYD7	-

Gene: Ccdc88a ENSRNOG00000004057

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Gene: Ccdc88a ENSRNOG00000004057

Summary

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