Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmp1 ENSRNOG00000003967

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Description

vacuole membrane protein 1 [Source:RGD Symbol;Acc:70367]

Gene Synonyms

Tmem49

Location

Primary_assembly 10: 71,903,227-72,002,319 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 261 orthologues, 4 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099166.2	Vmp1-202	1951	436aa	ENSRNOP00000093672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000005658.5	Vmp1-201	1971	406aa	ENSRNOP00000005658.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HHR4 Q91ZQ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000155346.1	Vmp1-204	1890	379aa	ENSRNOP00000106641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000109003.2	Vmp1-203	1803	350aa	ENSRNOP00000093091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJA5	-

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Summary

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