Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Scoc ENSRNOG00000003853

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Description

short coiled-coil protein [Source:RGD Symbol;Acc:1311860]

Gene Synonyms

LOC364981

Location

Primary_assembly 19: 24,659,651-24,693,217 forward strand.

mRatBN7.2:CM026992.1

About this gene

This gene has 5 transcripts (splice variants), 281 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110184.1	Scoc-203	1950	150aa	ENSRNOP00000089827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115332.1	Scoc-204	2345	81aa	ENSRNOP00000094199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AML3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000005124.8	Scoc-201	1692	125aa	ENSRNOP00000005124.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q216	-
ENSRNOT00000116209.1	Scoc-205	1652	82aa	ENSRNOP00000088593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGD9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105067.1	Scoc-202	291	47aa	ENSRNOP00000096248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLI5	-

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Summary

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