Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Stx8 ENSRNOG00000003849

.

Description

syntaxin 8 [Source:RGD Symbol;Acc:61917]

Location

Primary_assembly 10: 53,153,523-53,429,541 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 7 transcripts (splice variants), 185 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005204.6	Stx8-201	1262	318aa	ENSRNOP00000005204.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q1F1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000132933.1	Stx8-204	2041	287aa	ENSRNOP00000112080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000148583.1	Stx8-206	1962	253aa	ENSRNOP00000098774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000170998.1	Stx8-207	1261	273aa	ENSRNOP00000105192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000137475.1	Stx8-205	1081	245aa	ENSRNOP00000107626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000124616.1	Stx8-203	1054	256aa	ENSRNOP00000112058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000116831.2	Stx8-202	663	220aa	ENSRNOP00000079694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZP38	-

.

Summary

.

.