Gene: Slit2 ENSRNOG00000003840

Description

slit guidance ligand 2 [Source:RGD Symbol;Acc:69310]

Gene Synonyms

slit-2

Location

Primary_assembly 14: 62,617,067-62,955,948 reverse strand.

mRatBN7.2:CM026987.1

About this gene

This gene has 5 transcripts (splice variants), 194 orthologues, 24 paralogues and is associated with 25 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098728.1	Slit2-203	7186	1542aa	ENSRNOP00000094520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000081601.2	Slit2-202	7159	1533aa	ENSRNOP00000075258.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA49	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000005477.8	Slit2-201	7135	1525aa	ENSRNOP00000005477.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MA79	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000101023.1	Slit2-204	6396	1535aa	ENSRNOP00000089142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6K5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000117062.1	Slit2-205	2239	205aa	ENSRNOP00000096652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B4I9	-

Gene: Slit2 ENSRNOG00000003840

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Gene: Slit2 ENSRNOG00000003840

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