Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sytl5 ENSRNOG00000003585

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Description

synaptotagmin-like 5 [Source:RGD Symbol;Acc:631342]

Location

Primary_assembly X: 12,788,698-13,030,175 reverse strand.

mRatBN7.2:CM026994.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues, 31 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114439.1	Sytl5-203	4806	753aa	ENSRNOP00000094316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000113935.1	Sytl5-202	4876	679aa	ENSRNOP00000089213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9C3	-
ENSRNOT00000004785.6	Sytl5-201	3072	731aa	ENSRNOP00000004785.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V6F7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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