Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Capn8 ENSRNOG00000003468

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Description

calpain 8 [Source:RGD Symbol;Acc:620085]

Gene Synonyms

CL-2', Cls4, nCL-2

Location

Primary_assembly 13: 96,783,667-96,847,820 forward strand.

GRCr8:CM070403.1

About this gene

This gene has 3 transcripts (splice variants), 147 orthologues, 18 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000067005.6	Capn8-202	2710	753aa	ENSRNOP00000062898.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q78EJ9-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096500.2	Capn8-203	2463	634aa	ENSRNOP00000097093.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASA4	-
ENSRNOT00000004649.8	Capn8-201	2170	381aa	ENSRNOP00000004649.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q78EJ9-2	-

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Summary

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