Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Stx6 ENSRNOG00000003402

.

Description

syntaxin 6 [Source:RGD Symbol;Acc:61915]

Gene Synonyms

MGC93348, Syn6

Location

Primary_assembly 13: 69,882,620-69,931,036 forward strand.

GRCr8:CM070403.1

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues, 1 paralogue and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099649.2	Stx6-202	2506	317aa	ENSRNOP00000080858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q63635	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000157101.1	Stx6-204	2290	245aa	ENSRNOP00000109135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128442.1	Stx6-203	2006	255aa	ENSRNOP00000103517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000035145.6	Stx6-201	965	255aa	ENSRNOP00000037536.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QLH0	-

.

Summary

.

.