Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Caskin1 ENSRNOG00000003195

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Description

CASK interacting protein 1 [Source:RGD Symbol;Acc:620191]

Location

Primary_assembly 10: 13,513,465-13,533,377 forward strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 3 transcripts (splice variants), 249 orthologues, 1 paralogue and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000004486.6	Caskin1-201	5854	1430aa	ENSRNOP00000004486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XK13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000109050.1	Caskin1-203	5686	1374aa	ENSRNOP00000082739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVH8	-
ENSRNOT00000043951.5	Caskin1-202	5641	1359aa	ENSRNOP00000039956.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZE17	-

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Summary

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