Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Rasgef1c ENSRNOG00000003005

.

Description

RasGEF domain family, member 1C [Source:RGD Symbol;Acc:1311549]

Gene Synonyms

LOC360519

Location

Primary_assembly 10: 34,728,573-34,794,763 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 185 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000151333.1	Rasgef1c-204	2335	479aa	ENSRNOP00000112065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000059277.4	Rasgef1c-201	2229	466aa	ENSRNOP00000056044.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HDY8 D3ZVN9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000098334.2	Rasgef1c-202	2114	469aa	ENSRNOP00000094236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL57	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000112439.2	Rasgef1c-203	1982	425aa	ENSRNOP00000094068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALC8	-

.

Summary

.

.