Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hgd ENSRNOG00000002701

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Description

homogentisate 1, 2-dioxygenase [Source:RGD Symbol;Acc:1308757]

Gene Synonyms

LOC360719

Location

Primary_assembly 11: 63,086,752-63,138,323 reverse strand.

mRatBN7.2:CM026984.1

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000003645.7	Hgd-201	1670	445aa	ENSRNOP00000003645.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V6C2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000111464.1	Hgd-202	1408	404aa	ENSRNOP00000086943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A719	-

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Summary

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