Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nup54 ENSRNOG00000002247

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Description

nucleoporin 54 [Source:RGD Symbol;Acc:619926]

Location

Primary_assembly 14: 15,617,679-15,636,028 forward strand.

mRatBN7.2:CM026987.1

About this gene

This gene has 2 transcripts (splice variants), 192 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000003070.6	Nup54-201	2301	510aa	ENSRNOP00000003070.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70582	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000118729.1	Nup54-202	2121	487aa	ENSRNOP00000081526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV73	-

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Summary

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