Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ociad1 ENSRNOG00000002205

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Description

OCIA domain containing 1 [Source:RGD Symbol;Acc:1359549]

Location

Primary_assembly 14: 35,251,333-35,269,283 reverse strand.

GRCr8:CM070404.1

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094276.2	Ociad1-202	929	252aa	ENSRNOP00000097451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000114537.2	Ociad1-204	1583	193aa	ENSRNOP00000079989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNM9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000002996.7	Ociad1-201	1347	247aa	ENSRNOP00000002996.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q028 Q5XIG4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000108569.2	Ociad1-203	896	241aa	ENSRNOP00000083306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWR4	-
ENSRNOT00000119596.2	Ociad1-205	402	134aa	ENSRNOP00000080906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQT6	-

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Summary

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