Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Pathway
Molecular interactions
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ID History
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Gene: Mepe ENSRNOG00000002154

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Description

matrix extracellular phosphoglycoprotein [Source:RGD Symbol;Acc:71036]

Gene Synonyms

OF45

Location

Primary_assembly 14: 5,725,175-5,736,996 reverse strand.

GRCr8:CM070404.1

About this gene

This gene has 4 transcripts (splice variants), 90 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091558.3	Mepe-202	1827	462aa	ENSRNOP00000074247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X0WLY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000142563.1	Mepe-204	1963	446aa	ENSRNOP00000110781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000002927.8	Mepe-201	1853	454aa	ENSRNOP00000002927.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X0UXX8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000129722.1	Mepe-203	1367	396aa	ENSRNOP00000102406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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