Gene: Ccdc116 ENSRNOG00000001860

Description

coiled-coil domain containing 116 [Source:RGD Symbol;Acc:1310080]

Gene Synonyms

LOC287936, Sdf2l1

Location

GRCr8:CM070401.1

About this gene

This gene has 2 transcripts (splice variants), 84 orthologues and is associated with 1 phenotype.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000041557.4	Ccdc116-201	2734	697aa	ENSRNOP00000040746.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QMP9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000125813.1	Ccdc116-202	2220	540aa	ENSRNOP00000102138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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