Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc12a8 ENSRNOG00000001792

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Description

solute carrier family 12, member 8 [Source:RGD Symbol;Acc:628730]

Gene Synonyms

Ccc9

Location

Primary_assembly 11: 80,622,000-80,771,659 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 6 transcripts (splice variants), 189 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000040167.7	Slc12a8-202	2406	712aa	ENSRNOP00000045345.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AAY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000108813.2	Slc12a8-204	2435	656aa	ENSRNOP00000081818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G6I7	-
ENSRNOT00000002439.9	Slc12a8-201	2431	705aa	ENSRNOP00000002439.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IRK4 F1M7M6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000086495.3	Slc12a8-203	2317	667aa	ENSRNOP00000072100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K244	-
ENSRNOT00000119564.2	Slc12a8-205	2284	625aa	ENSRNOP00000091705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AE65	-
ENSRNOT00000165564.1	Slc12a8-206	2063	657aa	ENSRNOP00000104872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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