Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Gene: C12h7orf50 ENSRNOG00000001289

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Description

similar to human chromosome 7 open reading frame 50 [Source:RGD Symbol;Acc:1566418]

Gene Synonyms

LOC498154

Location

Primary_assembly 12: 20,388,520-20,402,922 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 2 transcripts (splice variants) and 175 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001734.7	C12h7orf50-201	1655	224aa	ENSRNOP00000001734.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5I0E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000101891.2	C12h7orf50-202	1640	206aa	ENSRNOP00000092701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIG4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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