Gene: Col6a1 ENSRNOG00000001249

Description

collagen type VI alpha 1 chain [Source:RGD Symbol;Acc:1565398]

Gene Synonyms

LOC294337, RGD1565398

Location

GRCr8:CM070410.1

About this gene

This gene has 3 transcripts (splice variants), 127 orthologues, 36 paralogues and is associated with 13 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001679.9	Col6a1-201	4232	1034aa	ENSRNOP00000001679.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JKB7 D3ZUL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000072951.4	Col6a1-202	4079	983aa	ENSRNOP00000067777.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RDR9	-
ENSRNOT00000170353.1	Col6a1-203	4025	965aa	ENSRNOP00000101411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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