Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cdk2ap1 ENSRNOG00000001070

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Description

cyclin-dependent kinase 2 associated protein 1 [Source:RGD Symbol;Acc:1308664]

Gene Synonyms

LOC360804

Location

Primary_assembly 12: 37,910,718-37,919,446 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 4 transcripts (splice variants), 184 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000166318.1	Cdk2ap1-204	1681	276aa	ENSRNOP00000102426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000107655.2	Cdk2ap1-203	1261	114aa	ENSRNOP00000078090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0BN48	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000100788.2	Cdk2ap1-202	1234	180aa	ENSRNOP00000084668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A030	-
ENSRNOT00000001419.7	Cdk2ap1-201	1094	87aa	ENSRNOP00000001419.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F7G5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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