Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Gene: Trappc5 ENSRNOG00000001003

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Description

trafficking protein particle complex subunit 5 [Source:RGD Symbol;Acc:1563971]

Gene Synonyms

LOC363858, RGD1563971

Location

Primary_assembly 12: 6,535,265-6,540,917 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 4 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111016.2	Trappc5-202	2290	302aa	ENSRNOP00000080732.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0BNE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000001327.8	Trappc5-201	3058	188aa	ENSRNOP00000001327.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRG8 B0BNE3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000169491.1	Trappc5-204	1181	188aa	ENSRNOP00000110690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRG8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000154449.1	Trappc5-203	742	188aa	ENSRNOP00000098767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRG8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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