Summary
- Splice variants
- Transcript comparison
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Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
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Gene: Pcp2 ENSRNOG00000000993

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Description

Purkinje cell protein 2 [Source:RGD Symbol;Acc:1306217]

Gene Synonyms

LOC304195

Location

Primary_assembly 12: 6,479,554-6,485,159 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 5 transcripts (splice variants), 105 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109866.2	Pcp2-203	762	171aa	ENSRNOP00000083460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZW35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115359.2	Pcp2-205	476	136aa	ENSRNOP00000078292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL58	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000001313.7	Pcp2-201	461	120aa	ENSRNOP00000001313.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KQ19 D3ZXP8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000112638.2	Pcp2-204	345	115aa	ENSRNOP00000080554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G6S3	-
ENSRNOT00000106760.2	Pcp2-202	315	105aa	ENSRNOP00000096666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APQ7	-

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Summary

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