Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Stx2 ENSRNOG00000000936

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Description

syntaxin 2 [Source:RGD Symbol;Acc:2558]

Gene Synonyms

Epim

Location

Primary_assembly 12: 33,315,750-33,350,788 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 6 transcripts (splice variants), 253 orthologues, 11 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001242.5	Stx2-201	2630	290aa	ENSRNOP00000001242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J0S7 G3V632	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099417.2	Stx2-204	3133	259aa	ENSRNOP00000085955.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P50279-2	-
ENSRNOT00000138236.1	Stx2-206	2686	275aa	ENSRNOP00000100146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000094953.2	Stx2-203	2508	282aa	ENSRNOP00000091323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF84	-
ENSRNOT00000037296.5	Stx2-202	1453	226aa	ENSRNOP00000036115.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHU9	-
ENSRNOT00000099729.2	Stx2-205	819	237aa	ENSRNOP00000092669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TS57	-

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Summary

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