Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C11h3orf38 ENSRNOG00000000720

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Description

similar to human chromosome 3 open reading frame 38 [Source:RGD Symbol;Acc:1359320]

Gene Synonyms

LOC100361713, LOC100362724, MGC95208

Location

Primary_assembly 11: 15,783,138-15,935,152 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 2 transcripts (splice variants), 213 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000911.7	C11h3orf38-201	2113	347aa	ENSRNOP00000000911.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66H33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000097208.2	C11h3orf38-202	1113	322aa	ENSRNOP00000085014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2B5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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