Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cmtr1 ENSRNOG00000000532

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Description

cap methyltransferase 1 [Source:RGD Symbol;Acc:1307801]

Gene Synonyms

Ftsjd2, LOC309656, LRRG00129, MTr1, RGD1307801

Location

Primary_assembly 20: 7,683,946-7,784,263 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 10 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111715.2	Cmtr1-206	5043	1276aa	ENSRNOP00000078940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000148048.1	Cmtr1-209	6842	889aa	ENSRNOP00000100380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000114324.2	Cmtr1-207	6648	851aa	ENSRNOP00000090691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIF5	-
ENSRNOT00000132629.1	Cmtr1-208	6558	821aa	ENSRNOP00000109922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000149277.1	Cmtr1-210	6406	810aa	ENSRNOP00000102805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000101461.2	Cmtr1-203	3687	814aa	ENSRNOP00000080385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPP4	-
ENSRNOT00000000640.6	Cmtr1-201	3597	782aa	ENSRNOP00000000640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U2Z5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000083108.3	Cmtr1-202	3108	1035aa	ENSRNOP00000073460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6QI79	-
ENSRNOT00000111387.2	Cmtr1-205	2869	800aa	ENSRNOP00000081353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSC9	-
ENSRNOT00000110367.2	Cmtr1-204	2772	875aa	ENSRNOP00000092438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHL4	-

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Summary

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