Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cpne5 ENSRNOG00000000522

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Description

copine 5 [Source:RGD Symbol;Acc:1308021]

Gene Synonyms

LOC309650

Location

Primary_assembly 20: 7,206,742-7,288,883 reverse strand.

mRatBN7.2:CM026993.1

About this gene

This gene has 4 transcripts (splice variants), 276 orthologues, 9 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110640.1	Cpne5-204	4283	610aa	ENSRNOP00000085748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000000629.5	Cpne5-201	4232	593aa	ENSRNOP00000000629.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGN2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000101285.1	Cpne5-202	4178	575aa	ENSRNOP00000079746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZN81	-
ENSRNOT00000108791.1	Cpne5-203	4172	573aa	ENSRNOP00000090957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AER2	-

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Summary

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