Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tulp1 ENSRNOG00000000507

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Description

TUB like protein 1 [Source:RGD Symbol;Acc:1311062]

Gene Synonyms

LOC309900

Location

Primary_assembly 20: 6,413,901-6,425,833 reverse strand.

GRCr8:CM070410.1

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues, 5 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113572.2	Tulp1-204	2054	544aa	ENSRNOP00000087284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095895.2	Tulp1-202	1901	493aa	ENSRNOP00000076985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJC5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000066897.3	Tulp1-201	1823	467aa	ENSRNOP00000063884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JJQ9 D3ZWB5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000097363.2	Tulp1-203	1549	487aa	ENSRNOP00000077059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YC55	-

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Summary

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