Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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Genetic Variation
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Gene: Ggnbp1 ENSRNOG00000000486

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Description

gametogenetin binding protein 1 [Source:RGD Symbol;Acc:1359729]

Gene Synonyms

MGC124911

Location

Primary_assembly 20: 5,101,165-5,118,030 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 2 transcripts (splice variants) and 59 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000577.8	Ggnbp1-201	1316	377aa	ENSRNOP00000000577.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5J2D6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000119446.2	Ggnbp1-202	859	264aa	ENSRNOP00000076712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5H8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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