Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Syngap1 ENSRNOG00000000483

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Description

synaptic Ras GTPase activating protein 1 [Source:RGD Symbol;Acc:621090]

Location

Primary_assembly 20: 5,026,707-5,057,751 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 10 transcripts (splice variants), 278 orthologues, 9 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000144559.1	Syngap1-208	5136	1354aa	ENSRNOP00000112405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000116745.2	Syngap1-203	5103	1343aa	ENSRNOP00000079584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNB6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000120108.2	Syngap1-204	5038	1284aa	ENSRNOP00000089675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAC7	-
ENSRNOT00000133620.1	Syngap1-207	5037	1278aa	ENSRNOP00000103247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000147178.1	Syngap1-210	5013	1270aa	ENSRNOP00000105576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000123577.1	Syngap1-206	4718	1277aa	ENSRNOP00000112478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144726.1	Syngap1-209	4492	1255aa	ENSRNOP00000107559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000123027.1	Syngap1-205	4180	1267aa	ENSRNOP00000111613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000000572.10	Syngap1-201	4018	1315aa	ENSRNOP00000000572.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARS6 D3ZCL8	-
ENSRNOT00000040859.9	Syngap1-202	4006	1311aa	ENSRNOP00000044041.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQW8	-

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Summary

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