Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmcc2 ENSRNOG00000000033

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Description

transmembrane and coiled-coil domain family 2 [Source:RGD Symbol;Acc:1311960]

Gene Synonyms

LOC305095, RGD1311960

Location

Primary_assembly 13: 46,346,177-46,383,862 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 3 transcripts (splice variants), 220 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000036.7	Tmcc2-201	3516	706aa	ENSRNOP00000000036.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IC49 D3ZE26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000100441.2	Tmcc2-202	2759	520aa	ENSRNOP00000084820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0X9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000104946.2	Tmcc2-203	2609	470aa	ENSRNOP00000082636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVA9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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