Transcript: ENSPTRT00000049923.4 TSPOAP1-203

Description

TSPO associated protein 1 [Source:VGNC Symbol;Acc:VGNC:9154]

Location

Chromosome 17: 57,589,977-57,612,571 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 63 domains and features and maps to 606 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000009450.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000049923.4	TSPOAP1-203	5604	1867aa	ENSPTRP00000041611.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R113	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000092715.1	TSPOAP1-201	7820	1854aa	ENSPTRP00000073921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBQ2 A0A6D2VX07	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000098652.1	TSPOAP1-202	7640	1794aa	ENSPTRP00000074079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SB60 A0A6D2WYX7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000087440.1	TSPOAP1-204	5577	1858aa	ENSPTRP00000074720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCE6	-
ENSPTRT00000083257.1	TSPOAP1-206	2412	803aa	ENSPTRP00000068504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUV6	-
ENSPTRT00000080755.1	TSPOAP1-205	2148	715aa	ENSPTRP00000073683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9G8	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 5,604 bps, Translation length: 1,867 residues

Version

ENSPTRT00000049923.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSPTRT00000049923.4 TSPOAP1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSPTRT00000049923.4 TSPOAP1-203

Summary

About Us

Get help

Our sister sites

Follow us