Transcript: ENSPTRT00000049726.4 PAX6-202

Description

paired box 6 [Source:VGNC Symbol;Acc:VGNC:1088]

Location

About this transcript

This transcript has 13 exons, is annotated with 63 domains and features and maps to 533 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096213.1	PAX6-201	3195	436aa	ENSPTRP00000065705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8P473 A0A6D2W9E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000049726.4	PAX6-202	2834	422aa	ENSPTRP00000042753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8P422 A0A6D2XNV3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 13, Coding exons: 10, Transcript length: 2,834 bps, Translation length: 422 residues

Version

ENSPTRT00000049726.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.