Transcript: ENSPTRT00000032206.6 CDX1-202

Description

caudal type homeobox 1 [Source:VGNC Symbol;Acc:VGNC:11880]

Location

About this transcript

This transcript has 3 exons, is annotated with 25 domains and features and maps to 347 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032206.6	CDX1-202	1765	265aa	ENSPTRP00000029751.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000091918.1	CDX1-201	468	155aa	ENSPTRP00000080150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUA4	-
ENSPTRT00000094371.1	CDX1-203	177	58aa	ENSPTRP00000085096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T792	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,765 bps, Translation length: 265 residues

Version

ENSPTRT00000032206.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.