Transcript: ENSPTRT00000025983.4 PRDM15-203

Description

PR/SET domain 15 [Source:VGNC Symbol;Acc:VGNC:58100]

Location

Chromosome 21: 28,311,369-28,411,353 reverse strand.

About this transcript

This transcript has 31 exons, is annotated with 100 domains and features and maps to 623 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000013930.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000025983.4	PRDM15-203	4491	1496aa	ENSPTRP00000053945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RAI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000080853.1	PRDM15-201	6727	1197aa	ENSPTRP00000077399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SK87 A0A6D2VY74	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000101246.1	PRDM15-202	6665	1177aa	ENSPTRP00000092811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUA5 A0A6D2WMW4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 31, Coding exons: 31, Transcript length: 4,491 bps, Translation length: 1,496 residues

Version

ENSPTRT00000025983.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSPTRT00000025983.4 PRDM15-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSPTRT00000025983.4 PRDM15-203

Summary

About Us

Get help

Our sister sites

Follow us