Transcript: ENSPTRT00000006641.6 ALX4-202

Description

ALX homeobox 4 [Source:VGNC Symbol;Acc:VGNC:11255]

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107434.1	ALX4-201	5836	411aa	ENSPTRP00000083300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T249 A0A6D2Y2Q5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000006641.6	ALX4-202	1164	387aa	ENSPTRP00000006127.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q3G4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,164 bps, Translation length: 387 residues

Version

ENSPTRT00000006641.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.