Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSPTRT00000042784.5 NSD1-203

.

Description

nuclear receptor binding SET domain protein 1 [Source:VGNC Symbol;Acc:VGNC:6953]

Location

Chromosome 5: 177,798,601-177,968,759 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 86 domains and features and maps to 780 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000017575.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107441.1	NSD1-201	13361	2697aa	ENSPTRP00000073740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9S5 A0A6D2Y6W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000078053.1	NSD1-202	12312	2428aa	ENSPTRP00000067069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663DFW2 K7DBF3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000042784.5	NSD1-203	7998	2665aa	ENSPTRP00000044805.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R328	-
ENSPTRT00000101090.1	NSD1-207	7236	2411aa	ENSPTRP00000081422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SXW0	-
ENSPTRT00000080438.1	NSD1-206	1641	546aa	ENSPTRP00000062530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RD17	-
ENSPTRT00000104327.1	NSD1-205	1632	543aa	ENSPTRP00000072043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5C3	-
ENSPTRT00000090439.1	NSD1-204	204	67aa	ENSPTRP00000071607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3M1 A0A6D2W540	-

.

Protein summary

.

Protein domains for ENSPTRP00000044805.5

.