Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSPTRT00000032206.6 CDX1-202

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Description

caudal type homeobox 1 [Source:VGNC Symbol;Acc:VGNC:11880]

Location

Chromosome 5: 150,365,081-150,382,843 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 27 domains and features and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000017411.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032206.6	CDX1-202	1765	265aa	ENSPTRP00000029751.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000091918.1	CDX1-201	468	155aa	ENSPTRP00000080150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUA4	-
ENSPTRT00000094371.1	CDX1-203	177	58aa	ENSPTRP00000085096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T792	-

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Protein summary

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Protein domains for ENSPTRP00000029751.6

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