Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSPTRT00000030252.6 AFF1-203

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Description

ALF transcription elongation factor 1 [Source:VGNC Symbol;Acc:VGNC:2949]

Location

Chromosome 4: 89,363,000-89,491,390 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 44 domains and features and maps to 598 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000016255.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000103669.1	AFF1-201	4871	1218aa	ENSPTRP00000086127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YAL1 K7AL91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000030252.6	AFF1-203	3633	1210aa	ENSPTRP00000027923.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XRE0 H2QPU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000082517.1	AFF1-204	3600	1199aa	ENSPTRP00000088947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TI76	-
ENSPTRT00000096788.1	AFF1-205	3591	1196aa	ENSPTRP00000074253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SB32	-
ENSPTRT00000090685.1	AFF1-202	3099	1020aa	ENSPTRP00000085891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9H9	-

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Protein summary

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Protein domains for ENSPTRP00000027923.6

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