Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSPTRT00000025574.3 GATA5-202

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Description

GATA binding protein 5 [Source:VGNC Symbol;Acc:VGNC:6110]

Location

Chromosome 20: 64,564,454-64,578,359 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 31 domains and features and maps to 298 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000013711.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000079838.1	GATA5-201	4490	397aa	ENSPTRP00000074867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK53 H2QKQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000025574.3	GATA5-202	4103	397aa	ENSPTRP00000023606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK53 H2QKQ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Protein summary

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Protein domains for ENSPTRP00000023606.3

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