Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSPTRT00000009829.6 NR1H4-201

.

Description

nuclear receptor subfamily 1 group H member 4 [Source:VGNC Symbol;Acc:VGNC:5505]

Location

Chromosome 12: 103,265,270-103,356,142 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 31 domains and features and maps to 453 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000005345.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107829.1	NR1H4-204	2206	486aa	ENSPTRP00000072319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5L3 A0A6D2WFS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000009829.6	NR1H4-201	3147	472aa	ENSPTRP00000009088.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WHK3 H2Q6P6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000105342.1	NR1H4-203	1278	425aa	ENSPTRP00000075060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SDF1 A0A6D2WWJ2	-
ENSPTRT00000090727.1	NR1H4-202	138	45aa	ENSPTRP00000067629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RSK8 A0A6D2XUG0	-

.

Protein summary

.

Protein domains for ENSPTRP00000009088.5

.