Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSPTRT00000001768.6 GBP1-201

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Description

guanylate binding protein 1 [Source:VGNC Symbol;Acc:VGNC:6829]

Location

Chromosome 1: 89,539,106-89,552,140 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features and maps to 699 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000000935.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000111454.1	GBP1-202	1785	594aa	ENSPTRP00000084028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T477	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000001768.6	GBP1-201	3049	592aa	ENSPTRP00000001614.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WIX7 H2PZC9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077288.1	GBP1-203	1719	572aa	ENSPTRP00000070577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0V9	-
ENSPTRT00000109725.1	GBP1-204	1530	509aa	ENSPTRP00000064330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RIY5	-

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Protein summary

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Protein domains for ENSPTRP00000001614.5

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