Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RORA ENSPTRG00000052707

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Description

RAR related orphan receptor A [Source:VGNC Symbol;Acc:VGNC:7524]

Location

Chromosome 15: 41,309,362-42,047,192 reverse strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 5 transcripts (splice variants), 394 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092918.1	RORA-203	1668	555aa	ENSPTRP00000087011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TCT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000081132.1	RORA-204	1644	547aa	ENSPTRP00000070723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2B3	-
ENSPTRT00000106975.1	RORA-202	1629	468aa	ENSPTRP00000081573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XII6 K7BIT0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000085024.1	RORA-205	1572	523aa	ENSPTRP00000066023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNV8 A0A6D2X5Y8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000086910.1	RORA-201	1449	482aa	ENSPTRP00000066740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RQ08	-

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Summary

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