Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN5 ENSPTRG00000049993

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Description

calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]

Location

Chromosome 11: 77,112,185-77,169,027 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 3 transcripts (splice variants), 284 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000088776.1	CAPN5-202	2043	680aa	ENSPTRP00000062899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RE06 A0A6D2X2E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000076782.1	CAPN5-201	4410	640aa	ENSPTRP00000073431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X491 K6ZPM2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000104646.1	CAPN5-203	159	52aa	ENSPTRP00000072403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S781 A0A6D2Y5Y1	-

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Summary

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