Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL12 ENSPTRG00000046813

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Description

C-X-C motif chemokine ligand 12 [Source:VGNC Symbol;Acc:VGNC:58899]

Location

Chromosome 10: 46,230,056-46,245,247 reverse strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 4 transcripts (splice variants) and 266 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108838.1	CXCL12-204	1197	140aa	ENSPTRP00000067989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTQ1 A0A6D2VTY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000102247.1	CXCL12-201	3526	93aa	ENSPTRP00000064148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W3M7 K7DAF8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000084635.1	CXCL12-202	3371	103aa	ENSPTRP00000070935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JDN2 A0A6D2WG53	-
ENSPTRT00000081975.1	CXCL12-203	3040	119aa	ENSPTRP00000089336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WXY5 K7CC53	-

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Summary

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